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Computational and Systems Biology

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3 upcoming talks and 530 talks in the archive.

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Quantitative Biology Seminar

**Seminar cancelled**

UserDr Mohammed Lotfollahi, Wellcome Sanger Institute.

HouseCRUK CI Lecture Theatre.

ClockMonday 30 September 2024, 12:00-13:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Cell size - A new hallmark of aging?

UserJette Lengefeld, University of Helsinki and Karolinska Institute.

HouseCRUK CI Lecture Theatre.

ClockMonday 26 February 2024, 12:30-13:30

Seminars on Quantitative Biology @ CRUK Cambridge Institute

TBC

UserFernando Santini, Memorial Sloan Kettering Cancer Center.

HouseCRUK CI.

ClockMonday 23 October 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Finding Target-Disease-Drug evidences from Literature and supporting curators. Please note: the details of this talk have changed

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserMatthew Jeffryes and Santosh Tirunagari, EMBL-EBI.

HouseCMS, Meeting Room 15.

ClockWednesday 15 March 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Discovering the gene networks that regulate hunger

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserKatherine Lawler, Research Associate Wellcome-MRC Institute of Metabolic Science, Addenbrooke's Hospital.

HouseCMS, Meeting Room 15.

ClockWednesday 08 March 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Computational Biology in Drug Discovery

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserPhilippe Sanseau, GSK Senior Fellow, Head In Silico Target Biology, Computational Biology, Genomic Sciences.

HouseCMS, Meeting Room 15.

ClockWednesday 01 March 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Seeing the Unseen

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserJordan P. Skittrall, NIHR Clinical Lecturer in Virology and Honorary Specialty Registrar in Infectious Diseases and Medical Virology, Division of Virology, Department of Pathology.

HouseCMS, Meeting Room 15.

ClockWednesday 22 February 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Mapping DNA replication stress in parasites and cancer cells with long-read sequencing and AI

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserDr. Michael A. Boemo, Research Group Leader, Department of Pathology.

HouseCMS, Meeting Room 15.

ClockWednesday 15 February 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Research in the Goldman group: pandemic-scale phylogenetics, and optimizing new sequencing technologies

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserNick Goldman and Nicola De Maio, EMBL-European Bioinformatics Institute.

HouseCMS, Meeting Room 15.

ClockWednesday 08 February 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Does computational biology explain Fibonacci numbers in plants?

Meetings are planned to take place in person. Seminars are principally for MPhil students. Please email the adminstrator should you wish to attend as a guest

UserJonathan Swinton.

HouseCMS, Meeting Room 15.

ClockWednesday 01 February 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Computational image analysis for coeliac disease diagnosis

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserBen Schreiber, Image Analysis Team, Dept of Pathology.

HouseCMS, Meeting Room 15.

ClockWednesday 25 January 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Bioinformatic analysis of T-cell antigen receptors as a novel diagnostic test for coeliac disease/ gluten sensitivity

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserDr Elizabeth Soilleux, University Senior Lecturer/ Honorary Consultant in Pathology.

HouseCMS, Meeting Room 15.

ClockWednesday 18 January 2023, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Mapping somatic evolution with single-cell multi-omics

UserDan Landau, New York Genome Center | Weill Cornell Medicine.

HouseCRUK CI.

ClockMonday 09 January 2023, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Motile behaviour and evolution of bacteria in antibiotic landscapes

Meetings are planned to take place in person. Seminars are principally for MPhil students. Please email the adminstrator should you wish to attend as a guest

UserNuno Miguel Oliveira, DPhil, BBSRC Discovery Fellow & Teaching Bye-Fellow in Zoology (Christ's College).

HouseCMS, Meeting Room 15.

ClockWednesday 30 November 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

On the Evolutionary History of Metastatic Cancer

UserKamila Naxerova, PhD, Dana-Farber/Harvard Cancer Centre.

HouseZoom.

ClockMonday 28 November 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Knowledge Graphs for Precision Oncology

Meetings are planned to take place in person. Seminars are principally for MPhil students. Please email the adminstrator should you wish to attend as a guest

UserKrishna C Bulusu Director, Early Data Science Oncology Data Science, Oncology R&D AstraZeneca.

HouseCMS, Meeting Room 15.

ClockWednesday 16 November 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Transmissible cancers: when cancer cells become infectious agents?

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserElizabeth Murchison, The Transmissible Cancer Group, Department of Veterinary Medicine..

HouseCMS, Meeting Room 15.

ClockWednesday 09 November 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Transmissible cancers: when cancer cells become infectious agents?

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserElizabeth Murchison, The Transmissible Cancer Group, Department of Veterinary Medicine..

HouseCMS, Meeting Room 15.

ClockWednesday 09 November 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Principles of Protein Structural Ensembles Determination

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserMichele Vendruscolo, Co-Director, Centre for Misfolding Diseases, Yusuf Hamied Department of Chemistry.

HouseCMS, Meeting Room 15.

ClockWednesday 02 November 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Buffering genetic variation in populations

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserRitwick Sawarkar, MRC Toxicology Unit.

HouseCMS, Meeting Room 15.

ClockWednesday 26 October 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

A semantics knowledge commons for climate change

Our intention is to deliver all Seminars in person. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserPeter Murray-Rust, Reader Emeritus in Molecular Informatics, Yusuf Hamied Department of Chemistry.

HouseCMS, Meeting Room 15.

ClockWednesday 19 October 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

An introduction to counts-of-counts data

Meetings are planned to take place in person. Seminars are principally for MPhil students. Please email the adminstrator should you wish to attend as a guest

UserSimon Tavaré PhD Herbert and Florence Irving Director Irving Institute for Cancer Dynamics & Professor, Departments of Statistics and Biological Sciences Columbia University.

HouseCMS, Meeting Room 15.

ClockWednesday 12 October 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Combining multi-omics and biological knowledge to extract disease mechanisms

Please contact Ciara for further details

UserJulio Saez-Rodriguez, Faculty of Medicine of Heidelberg University, Director of the Institute of Computational Biomedicine and Group Leader at the EMBL- Heidelberg University Molecular Medicine Partnership Unit (MMPU).

HouseCRUK CI Lecture Theatre.

ClockMonday 11 July 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Drug response and tolerance in normal and cancer cells

UserKlaas Mulder, Molecular Developmental Biology, Radboud University.

HouseCRUK CI Lecture Theatre.

ClockMonday 25 April 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Causality, Perturbations, Gene Regulation, and Drug Repurposing

UserCaroline Uhler, Co-Director of the Eric and Wendy Schmidt Center at the Broad Institute of MIT and Harvard.

HouseZoom.

ClockMonday 28 March 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Transmissible cancers: when cancer cells become infectious agents

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserElizabeth Murchison.

HouseCMS, Meeting Room 15.

ClockWednesday 02 March 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Accelerating drug discovery with the power of microscopy & AI

UserAnne E Carpenter, PhD, Senior Director of the Imaging Platform, Institute Scientist, Broad Institute .

Househttps://zoom.us/j/94056313546?pwd=N1dYVFR1b0FwNmk0eGlxeDd1OVY1QT09 .

ClockMonday 28 February 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Mining for meaning in electronic health records; deep semantic normalisation for precision medicine and discovery.

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserPaul Schofield.

HouseCMS, Meeting Room 15.

ClockWednesday 23 February 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Seeing the unseen: informatic approaches to find, characterise and drug conserved regions of nucleic acid in RNA viruses

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserJordan Skittrall (Department of Pathology, University of Cambridge).

HouseCMS, Meeting Room 15.

ClockWednesday 16 February 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Drug Discovery in the era of large-scale genetics and genomics data

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserPhilippe Sanseau (Glaxo SmithKline).

HouseCMS, Meeting Room 15.

ClockWednesday 09 February 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Machine learning with biomedical ontologies: applications in precision health

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserRobert Hoehndorf.

HouseCMS, Meeting Room 15.

ClockWednesday 02 February 2022, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Genomic and digital pathology approaches to elucidate cancer dormancy

Hybrid seminar, please join at: https://zoom.us/j/97592722368?pwd=eXg4bHN3SEJKMm5hRXpCZUtncnVBdz09

UserMaria Secrier, UCL Genetics Institute.

HouseCRUK CI Lecture Theatre.

ClockMonday 31 January 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Computational image analysis for coeliac disease diagnosis

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator

UserDr Jim Denholm, Postdoctoral visitor Dept. Applied Mathematics and Theoretical Physics, University of Cambridge.

HouseCMS, Meeting Room 15.

ClockWednesday 26 January 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Bioinformatic analysis of T-cell antigen receptors as a novel diagnostic test for coeliac disease/ gluten sensitivity

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserDr Elizabeth Soilleux, MA, MB BChir, PhD, FRCPath, PGDipMedEd University Senior Lecturer/ Honorary Consultant in Pathology, University of Cambridge.

HouseCMS, Meeting Room 15.

ClockWednesday 19 January 2022, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

An Introduction to Machine Learning in AstraZeneca

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserDomingo Salazar (AstraZeneca).

HouseCMS, Meeting Room 15.

ClockWednesday 24 November 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Principles of Protein Structural Ensembles Determination

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserMichele Vendruscolo (Department of Chemistry, University of Cambridge).

HouseCMS, Meeting Room 15.

ClockWednesday 17 November 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Elucidating inter-species interactions in microbial communities using metabolic models

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserKiran R. Patil (MRC Toxicology Unit, University of Cambridge).

HouseCMS, Meeting Room 15.

ClockWednesday 10 November 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

A multidimensional perspective on immune-mediated diseases: using genetic feature engineering to study shared risk factors in a reduced dimension space

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserGuillermo Reales (Dept. of Medicine, University of Cambridge).

HouseCMS, Meeting Room 15.

ClockWednesday 03 November 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Buffering genetic variation in populations

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserDr. Ritwick Sawarkar (MRC Toxicology Unit, University of Cambridge).

HouseCMS, Meeting Room 15.

ClockWednesday 27 October 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Computational Oncology at AstraZeneca

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserBen Sidders (AstraZeneca).

HouseCMS, Meeting Room 15.

ClockWednesday 20 October 2021, 14:00-15:00

Computational and Systems Biology Seminar Series 2023 - 24

Understanding DNA Replication with Nanopore Sequencing, Deep Learning, and Mathematical Modelling

Our intention is to deliver all Seminars in person, we will follow University Covid Guidance on this. Seminars are aimed mainly at MPhil CompBio students, but are open to anyone who wishes to attend by pre-booking with the Administrator.

UserDr. Michael A. Boemo (Department of Pathology, University of Cambridge) .

HouseCMS, Meeting Room 15.

ClockWednesday 13 October 2021, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Artificial intelligence for prediction of genetic alterations directly from histology images

Please email tania.smith@cruk.cam.ac.uk to request the Zoom registration link

UserProf Jakob Kather is a physician/scientist and assistant professor at RWTH Aachen University (Germany) with additional affiliations at the NCT Heidelberg (Germany) and the University of Leeds (UK). .

HouseZOOM (live).

ClockMonday 04 October 2021, 09:30-10:30

Computational and Systems Biology

CCBI Annual Symposium 2021

UserProgramme and registration: https://bit.ly/ccbisymp21.

HouseOnline via zoom.

ClockWednesday 12 May 2021, 09:00-17:00

Computational and Systems Biology

Regulation of gene expression and genome organisation

UserProf. Julie Ahringer (The Gurdon Institute, University of Cambridge).

HousePlease get in touch at compbiomphil@maths.cam.ac.uk for joining information..

ClockWednesday 17 February 2021, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Visualizing Spatial Single-Cell Data with Vitessce

Please email anna.toporska@cruk.cam.ac.uk by Friday 5th February to receive a ZOOM registration link

UserProf Nils Gehlenborg from Harvard Medical School .

HouseZOOM (live).

ClockMonday 08 February 2021, 15:00-16:15

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Deep learning in medical imaging - successes, pitfalls and challenges

Please email anna.toporska@cruk.cam.ac.uk by Friday 11th December to receive a ZOOM registration link

UserProf Lena Maier-Hein from DKFZ in Heidelberg .

HouseZOOM (live).

ClockMonday 14 December 2020, 15:00-16:15

Computational and Systems Biology

Can machines understand the scientific literature?

UserDr. Peter Murray-Rust (Department of Chemistry, University of Cambridge).

HousePlease get in touch at compbiomphil@maths.cam.ac.uk for joining information..

ClockWednesday 11 November 2020, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Computational analysis of cancer genomes

Please email anna.toporska@cruk.cam.ac.uk by Friday 6th November to receive a ZOOM registration link

UserProf Nuria Lopez-Bigas from Institute for Research in Biomedicine in Barcelona .

HouseZOOM (live).

ClockMonday 09 November 2020, 10:00-11:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Cancer Genetics Through the Lens of Mutational Signatures and the Two-Hit Hypothesis.

Please email anna.toporska@cruk.cam.ac.uk by Friday 16th October to receive a ZOOM registration link

UserDr Paz Polak from Icahn School of Medicine at Mount Sinai, New York.

HouseZOOM (live).

ClockMonday 19 October 2020, 16:30-17:30

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Characterizing and forecasting tumour evolution

Please email anna.toporska@cruk.cam.ac.uk by Friday 25 September to receive a ZOOM registration link

UserDr Robert Noble from City, University of London.

HouseZOOM (live).

ClockMonday 28 September 2020, 10:30-11:30

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Understanding regulatory systems and mechanisms of genetic interactions: from yeast to pediatric cancer

Please email anna.toporska@cruk.cam.ac.uk to receive a ZOOM registration link

UserDr Patrick Kemmeren from Princess Maxima Center in Utrecht, Netherlands .

HouseZOOM (live).

ClockMonday 20 July 2020, 11:30-12:30

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Statistical challenges posed by heterogeneous data from immunology and microbiology

Please email anna.toporska@cruk.cam.ac.uk by Friday 12th June to receive a ZOOM registration link

UserProfessor Susan Holmes from Stanford University .

HouseZOOM (live).

ClockMonday 15 June 2020, 10:00-11:15

Seminars on Quantitative Biology @ CRUK Cambridge Institute

“Focus on the Individual; The importance of chromosome-specific biology in generating aneuploidy patterns in cancer”

Please email anna.toporska@cruk.cam.ac.uk to receive a ZOOM registration link

UserDr Sarah McClelland from Barts Cancer Institute, Queen Mary University of London .

HouseZOOM (live).

ClockMonday 01 June 2020, 13:00-14:15

Seminars on Quantitative Biology @ CRUK Cambridge Institute

CANCELLED

UserDr Sarah McClelland from Barts Cancer Institute in London.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 04 May 2020, 13:00-14:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

CANCELLED

UserProfessor Valentina Boeva from Institute for Machine Learning in Zurich.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 30 March 2020, 13:00-14:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

A systems biology approach to identify perturbed processes driving cancer

UserProfessor Francesca D. Ciccarelli from King’s College London & The Francis Crick Institute.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 25 March 2019, 13:00-14:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Learning Engines for Healthcare: Using Machine Learning to Transform Clinical Practice and Discovery

UserProf Mihaela van der Schaar from Department of Applied Maths and Theoretical Physics, University of Cambridge.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 18 February 2019, 13:00-14:00

Computational and Systems Biology

Replacing pathologists with next generation diagnostics: use of artificial intelligence to analyse image and DNA sequencing data

UserDr Elizabeth Sollieux (Dept of Pathology), Dr Matt Thorpe (DAMTP) and Oliver Crook (MRC Biostatistics Unit/DAMTP).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 30 January 2019, 14:00-15:00

Computational and Systems Biology

Mathematical modelling of rapid evolutionary processes

UserDr Chris Illingworth ( Department of Genetics, Cambridge).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 21 November 2018, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Cancer Genome Evolution and Immune Escape

You must email Anna.Toporska@cruk.cam.ac.uk prior to the talk if you are not based in CRUK CI and you wish to attend.

UserDr Nicholas McGranahan from Francis Crick Institute in London.

HouseRoom 215, CRUK Cambridge Research Institute.

ClockMonday 12 November 2018, 13:00-14:00

Computational and Systems Biology

Discovering the gene networks that regulate hunger

UserDr Katherine Lawler (MRC Institute of Metabolic Science).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 07 November 2018, 14:00-15:00

Computational and Systems Biology

Personal Genomics

UserDr Julian Gough (MRC Laboratory of Molecular Biology).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 31 October 2018, 14:00-15:00

Computational and Systems Biology

Mapping the sub-cellular proteome

UserDr Laurent Gatto (Department of Applied Mathematics and Theoretical Physics).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 24 October 2018, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Gone fishing. Machine-learning guided discovery from public data.

UserProfessor Casey Greene from the Perelman School of Medicine at University of Pennsylvania .

HouseCRUK CI Lecture Theatre (Room 001).

ClockFriday 21 September 2018, 13:00-14:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Dissecting Receptor Tyrosine Kinase Signaling Networks by Quantitative Phosphoproteomics

UserProf. Jesper V. Olsen, Novo Nordisk Foundation Center for Protein Research (CPR), Faculty of Health and Medical Sciences, University of Copenhagen, Denmark.

HouseCRUK CI Lecture Theatre (Room 001).

ClockTuesday 16 January 2018, 13:00-14:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Enhancers as regulatory hubs in mammalian embryogenesis and human congenital disease

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserDr Alvaro Rada-Iglesias, CMMC - Center for Molecular Medicine Cologne, Germany.

HouseCRUK CI Room 009/009A.

ClockMonday 04 December 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Inferring the Evolutionary History of Cancers: Statistical Methods and Applications

All people external to CRUK CI needs to be booked as visitors. Thank you.

UserDr Andrew Roth, Ludwig Cancer Research, University of Oxford .

HouseCRUK CI Room 009/009A.

ClockMonday 27 November 2017, 16:00-17:00

Computational and Systems Biology

Mapping the sub-cellular proteome

UserDr Laurent Gatto, Department of Biochemistry.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 22 November 2017, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Mutational heterogeneity in promoter regions in melanoma

All external guests should arrive to the room at least 5 minutes before the start of the talk.

UserA/Prof. Dr Erik Larsson Lekholm, University of Gothenburg, Göteborg, Sweden .

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 30 October 2017, 16:00-17:00

Computational and Systems Biology

Data-driven approaches to drug target identification

UserDr Alex Gutteridge Director,Computational Biology TSci Computational Biology(UK) GSK.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 25 October 2017, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Improving Openness and Reproducibility of Scientific Research

Please note that this event will be recorded. Guests should arrive to the Lecture Theatre at leat 5-10 minutes prior the talk, swich off their phones and minimise disruption and noise level to the minimum. Use of wi-fi is not allowed during the talk.

UserDr Timothy Errington.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 23 October 2017, 16:00-17:00

Computational and Systems Biology

Personal Genomics

UserProfessor Julian Gough, MRC Laboratory of Molecular Biology.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 11 October 2017, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

To be confirmed

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserProf. Tomas Marques Bonet.

HouseCRUK CI Room 009/009A.

ClockMonday 25 September 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Coding and non-coding cancer mutations

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserProf. Dr Núria López-Bigas, ICREA Research Professor, IRB Barcelona.

HouseCRUK CI Room 009/009A.

ClockMonday 14 August 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Statistical Bioinformatics at Scale

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserProf. Alexander Schliep.

HouseCRUK CI Room 009/009A.

ClockMonday 22 May 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

To be confirmed

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserDr Paz Polak.

HouseCRUK CI Room 009/009A.

ClockMonday 15 May 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Building a bigger brain: genetic bases for the evolution of the human neocortex

All people external to CRUK CI needs to be booked as visitors. Please contact Kamila at least 24 hours prior the talk.Thank you.

UserProf. Gregory A. Wray.

HouseCRUK CI Room 009/009A.

ClockMonday 24 April 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Functional variation in the human genome: lessons from the transcriptome

If you have a question about this talk or would like to attend this talk but you are from outside CRUK CI, please contact Kamila.Lembrych-Turek. Please note that all external visitors have to be booked onto an internal visitors' booking system.

UserProf. Tuuli Lappalainen.

HouseCRUK CI Lecture Theatre (Room 001).

ClockMonday 03 April 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Alternative splicing: widespread fine-tuning regulatory process or costly errors?

All external to CRUK CI people need to be booked at least 24 hours prior the talk. Please contact Kamila by email if you would like to come.

UserDr Laurent Duret.

HouseCRUK CI Room 009/009A.

ClockMonday 13 March 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Alternative splicing: widespread fine-tuning regulatory process or costly errors?

All external to CRUK CI people need to be booked at least 24 hours prior the talk. Please contact Kamila by email if you would like to come.

UserDr Laurent Duret.

HouseCRUK CI Room 009/009A.

ClockMonday 13 March 2017, 16:00-17:00

Computational and Systems Biology

Two transmissible cancers in Tasmanian devils

UserDr Elizabeth Murchison, Dept. of Veterinary Medicine .

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 March 2017, 14:00-15:00

Computational and Systems Biology

Ribosome profiling and virus infection

UserDr Andrew Firth Division of Virology ( University of Cambridge, UK).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 February 2017, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

The blind watch-breaker: evolution at regulatory sites in cancer

If you have a question about this talk or would like to attend this talk but you are from outside CRUK CI, please contact Kamila.Lembrych-Turek. Please note that all external visitors have to be booked onto an internal visitors' booking system.

UserProf. Colin Semple.

HouseCRUK CI Room 215A/B.

ClockMonday 30 January 2017, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Modeling cancer evolution from genomic data

Please note that all external visitors have to be booked onto an internal visitors' booking system.

UserBeerenwinkel, Niko, Prof. Dr..

HouseCRUK CI Room 215A/B.

ClockFriday 13 January 2017, 16:15-17:15

CCIMI Seminars

A new perspective from Information Theory on genetic sequences

UserOmri Tal, Max Planck Institute for Mathematics in the Sciences.

HouseMR14 Centre for Mathematical Sciences.

ClockFriday 13 January 2017, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Title to be confirmed

If you have a question about this talk or would like to attend this talk but you are from outside CRUK CI, please contact Kamila.Lembrych-Turek. Please note that all external visitors have to be booked onto an internal visitors' booking system.

UserProfessor Christopher Yau.

HouseCRUK CI Room 009/009A.

ClockMonday 21 November 2016, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Transposable elements and epigenome evolution

If you have a question about this talk or would like to attend this talk but you are from outside CRUK CI, please contact Kamila.Lembrych-Turek. Please note that all external visitors have to be booked onto an internal visitors' booking system.

UserProf. Ting Wang.

HouseCRUK CI Lecture Theatre.

ClockTuesday 15 November 2016, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Evolution, genomics and mode of action of long noncoding RNAs in mammalian cells

If you have a question about this talk, please contact Kamila.Lembrych-Turek from CRUK CI.

UserDr. Igor Ulitsky.

HouseCRUK CI Room 215A/B.

ClockWednesday 19 October 2016, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Non-coding genome function in pancreatic islets and diabetes

If you have a question about this talk, please contact Kamila.Lembrych-Turek.

UserProfessor Jorge Ferrer.

HouseCRUK CI Room 009/009A.

ClockMonday 19 September 2016, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Sex chromosomes in development and disease

UserJames Turner (The Francis Crick Institute).

HouseCRUK CI Room 215A.

ClockMonday 13 June 2016, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Gene-drug interaction screens in cancer

UserSebastian Nijman (Ludwig Institute for Cancer Research Oxford).

HouseCRUK CI Room 215A/B.

ClockMonday 16 May 2016, 16:00-17:00

Cambridge Area Sequencing Informatics Meeting VIII (2016)

CASIM VIII: DISCUSSION 3 - Hot topics in transcriptomics

UserIrene Papatheodorous and Catalina Vallejos, with Angela Goncalves (WTSI), Davis McCarthy (EBI).

HouseDAMPT MR2.

ClockMonday 11 April 2016, 14:00-15:00

Cambridge Area Sequencing Informatics Meeting VIII (2016)

CASIM VIII: DISCUSSION 2: 3D genomics

UserTim Stevens, with Robert Beagrie (MDC Berllin), Paula Freire Pritchitt (Babraham Intstitute).

HouseDAMPT MR2.

ClockMonday 11 April 2016, 11:30-12:30

Cambridge Area Sequencing Informatics Meeting VIII (2016)

CASIM VIII: DISCUSSION 1 - Buggy science: improving bioinformatics software quality

UserJohn Davey (Zoology) and Gord Brown (CRUK) with Jennifer Liddle (WTSI) and Irina Colgiu (WTSI).

HouseDAMPT MR2.

ClockMonday 11 April 2016, 10:00-11:00

Cambridge Area Sequencing Informatics Meeting VIII (2016)

CASIM VIII: Reproducibility Workshop follow up

UserGord Brown (CRUK) and Ines de Santiago (CRUK).

HouseDAMPT MR2.

ClockMonday 11 April 2016, 09:30-10:00

Computational and Systems Biology

Comparative genomics of RNA viruses

UserDr Andrew Firth, Department of Pathology, University of Cambridge..

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 10 February 2016, 14:00-15:00

Computational and Systems Biology

Integrating Chemical and Biological Data for Drug Discovery

UserDr Andeas Bender, Centre for Molecular Informatics, Cambridge University. .

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 02 December 2015, 14:00-15:00

Computational and Systems Biology

Spatio-temporal organization of replication: On genome evolution and large-scale chromatin folding

UserBenjamin Audit, Laboratoire de Physique de l'Ecole Normale Supérieure de Lyon, France.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 04 November 2015, 14:00-15:00

Computational and Systems Biology

Bioinformatics to support cancer therapeutics

UserDr Dennis Wang and Dr. Manasa Ramakrishna, AstraZeneca. .

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 21 October 2015, 14:00-15:00

Computational and Systems Biology

Mapping the sub-cellular proteome

UserDr Laurent Gatto ( Department of Biochemistry, Cambridge.).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 14 October 2015, 14:00-15:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Title to be confirmed

CANCELED

UserOlivier Gevaert (Stanford University).

HouseCRUK CI Room 215A.

ClockMonday 24 August 2015, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Title to be confirmed

CANCELED

UserSean Grimmond (Glasgow).

HouseCRUK CI Lecture Theatre.

ClockMonday 27 July 2015, 16:00-17:00

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Title to be confirmed

UserIllés Farkas (Hungarian Academy of Sciences).

HouseCRUK CI Lecture Theatre.

ClockTuesday 19 May 2015, 16:00-17:00

Computational and Systems Biology

Clonally transmissible cancers in dogs and Tasmanian devils

UserDr Elizabeth Murchison. Department of Veterinary Medicine, Cambridge.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 04 March 2015, 14:00-15:00

Computational and Systems Biology

Genomics of transcription factor redundancy

UserProfessor Steve Russell, Department of Genetics, Cambridge.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 04 February 2015, 14:00-15:00

Computational and Systems Biology

There is no medicine except in the light of models

UserDr Pietro Lio, Cambridge University Computer Laboratory.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 21 January 2015, 14:00-15:00

Computational and Systems Biology

Simulation Approaches to Biomolecular Recognition and Assembly

UserDr Peter J Bond, Bioinformatics Institute (BII) A*STAR, Singapore..

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 03 December 2014, 14:00-15:00

Collaborative research: funding available for collaborative research out of Science and Technology Funding Council areas.

STFC collaborative R&D funding

Free parking on Clerk Maxwell Road (2 minutes from the Cavendish). Parking closer very limited, please email organiser if needed.

UserDr Vlad Skarda, STFC External Innovations.

HouseTCM - Seminar Room (room 530), Bragg Building, Cavendish Laboratory..

ClockWednesday 26 November 2014, 11:00-13:30

Computational and Systems Biology

Population genetic models of evolution

UserDr Chris Illingworth, Department of Genetics, Cambridge.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 22 October 2014, 14:00-15:00

Cambridge Area Sequencing Informatics Meeting VI (2014)

CASIM VI: Discussion 3 - Single Cell Sequencing

UserLed by Simon Andrews (Babraham Institute), Boris Adryan (CSBC), Misha Kapushesky (Genestack).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge, CB3 0WA.

ClockMonday 29 September 2014, 13:30-14:15

Cambridge Area Sequencing Informatics Meeting VI (2014)

CASIM VI: Discussion 2 - Long Read / New Technologies

UserLed by Rory Stark (CRUK Cambridge Institute), David Jackson (WT Sanger Institute).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge CB3 0WA.

ClockMonday 29 September 2014, 11:00-11:45

Cambridge Area Sequencing Informatics Meeting VI (2014)

CASIM VI: Discussion 1 - Local Computational Resources and Issues

UserLed by Misha Kapushesky (Genestack), Aylwyn Scally (Genetics), David Jackson (WT Sanger Institute).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge, CB3 0WA.

ClockMonday 29 September 2014, 09:30-10:30

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Mapping tumor heterogeneity and developmental trajectories using 40 markers at single cell resolution:

Room change: 215 instead of lecture theatre (outside guests will need visitor ID)

UserDana Pe'er (Columbia University, NYC).

HouseCancer Research UK Cambridge Research Institute, Room 215.

ClockMonday 29 April 2013, 16:00-17:00

Computational and Systems Biology

Machine learning approaches to predicting protein-ligand binding

UserDr. Pedro J. Ballester, MRC Methodology Research Fellow and EMBL-EBI.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 20 February 2013, 14:00-15:00

Computational and Systems Biology

Evolution of post-translational networks

UserDr. Pedro Beltrao, EMBL-European Bioinformatics Institute.

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 16 January 2013, 14:00-15:00

Computational and Systems Biology

The Dog That Didn't Bark: How Computational Analysis of Complex Cell Signaling Data Can Find Surprising Critical Regulatory Nodes

Please contact Dr. Julio Saez-Rodriguez if you wish to attend this talk as he will need to inform security

UserDoug Lauffenberger (MIT).

HouseThe Crick Auditorium, Wellcome Trust Campus, Hinxton.

ClockFriday 12 October 2012, 12:00-01:00

Plant Sciences 'ABC' Seminars

Introduction to Metabolomics

UserDr Matthew Davey, Plant Metabolism Group, Department of Plant Sciences..

HouseDepartment of Plant Sciences, Large Lecture Theatre.

ClockFriday 04 May 2012, 16:30-17:00

Computational and Systems Biology

Approximate Bayesian Computation for evolution in a test tube

UserProfessor Simon Tavare ( CCBI, CRI-CRUK, DAMTP, University of Cambridge).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 09 November 2011, 14:00-15:00

Computational and Systems Biology

tba

UserRichard Durbin (Wellcome Trust Sanger Institute).

HouseMR4, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 02 November 2011, 14:00-15:00

One Day Meeting - 6th Annual Symposium of the Cambridge Computational Biology Institute

Title to be confirmed

UserDr. Michele Vendruscolo ( Department of Chemistry, University of Cambridge).

HouseCentre for Mathematical Sciences, Meeting Room 2.

ClockWednesday 19 May 2010, 15:30-16:00

One Day Meeting - 6th Annual Symposium of the Cambridge Computational Biology Institute

Ultrasound elastography

UserDr Graham Treece (University of Cambridge, Department of Engineering).

HouseCentre for Mathematical Sciences, Meeting Room 2.

ClockTuesday 06 April 2010, 11:15-11:45

Seminars on Quantitative Biology @ CRUK Cambridge Institute

Title to be confirmed

UserFrancesca D. Ciccarelli Professor of Cancer Genomics | King’s College London| The Francis Crick Institute.

HouseCRUK CI Lecture Theatre (Room 001).

ClockThursday 25 March 2010, 13:00-14:00

Computational and Systems Biology

Title to be confirmed

UserProf Ed Bullmore, Department of Psychiatry.

HouseMR15, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 03 March 2010, 15:00-16:00

All CMS Events

Open Afternoon for MPhil in Computational Biology

UserProfessor Simon Tavare and others.

HouseCentre for Mathematical Sciences, Meeting Room 3.

ClockWednesday 17 February 2010, 14:00-17:00

Cambridge Next Generation Sequencing Bioinformatics Day

Next Generation Sequencing Bioinformatics Day Workshop 4: Counting and comparing

Workshop covers peak calling, segmentation , enrichment, differential expression, normalisation, transcriptomics, ChIPseq.

UserDr Krys Kelly (Lead).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockMonday 18 May 2009, 15:15-16:15

Cambridge Next Generation Sequencing Bioinformatics Day

Next Generation Sequencing Bioinformatics Day Workshop 3: Assembly / Structural variation

Workshop covers de novo assemblers, paired end data, integrating data from different technologies, structural variation.

UserAylwyn Scally (Lead).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockMonday 18 May 2009, 13:30-14:45

Cambridge Next Generation Sequencing Bioinformatics Day

Next Generation Sequencing Bioinformatics Day Workshop 2: Alignment

Workshop covers: Speed, sensitivity, alignment formats, repeats, SNPs, indels.

UserMario Caccamo (Lead).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockMonday 18 May 2009, 11:30-12:30

Cambridge Next Generation Sequencing Bioinformatics Day

Next Generation Sequencing Bioinformatics Day Workshop 1: Data Production

Workshop covers Primary pipeline processing: quality scores, multiplexing; Data management: metadata, data storage, data delivery.

UserRory Stark (Lead).

HouseCentre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockMonday 18 May 2009, 09:15-10:15

SciComp@Cam: Scientific Computing in Cambridge

Provisional: Christmas Quiz

Canceled

UserSpeakers to be confirmed.

HouseCCBI, Centre for Mathematical Sciences.

ClockThursday 11 December 2008, 17:30-19:30

Computational and Systems Biology

" The dynamics of parasite-mediated competition"

UserOlivier Restif, CIDC, The Veterinary School, University of Cambridge.

HouseMR15, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 19 November 2008, 15:00-16:00

SciComp@Cam: Scientific Computing in Cambridge

Title to be confirmed

UserSpeakers to be confirmed.

HouseCCBI, Centre for Mathematical Sciences.

ClockThursday 13 November 2008, 17:30-19:30

Computational and Systems Biology

Simultaneous Determination of Protein Structure and Dynamics

UserDr. Michele Vendruscolo, Department of Chemistry, University of Cambridge.

HouseMR14, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 29 October 2008, 15:00-16:00

Horizon: Bioengineering

Cambridge Stem Cell Initiative

UserProfessor Roger Pedersen, Centre for Regenerative Medicine.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 16:30-17:00

Horizon: Bioengineering

Cambridge Physics of Medicine Initiative

registration is required for this event

UserProfessor Athene Donald, Director, Centre for Physics of Medicine.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 16:00-16:30

Horizon: Bioengineering

Materials for Medical Engineering

Medical Engineering

UserDr Ruth Cameron, Centre for Medical Materials, Department of Materials Science and Metallurgy.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 14:30-15:00

Horizon: Bioengineering

Reconstructing the Bacterial Cell Factory

Synthetic Biology

UserDr David Summers, Department of Genetics.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 14:30-15:00

Horizon: Bioengineering

Strategies for bringing back function to the damaged nervous system

Medical Engineering (registration is required for this event)

UserProfessor James Fawcett, Centre for Brain Repair.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 14:00-14:30

Horizon: Bioengineering

Tools for Engineering Morphogenesis in Plants

Synthetic Biology

UserDr Jim Haseloff, Department of Plant Sciences.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 14:00-14:30

Horizon: Bioengineering

Molecular assembly lines for drug biosynthesis

Synthetic Biology

UserProfessor Peter Leadley (Department of Biochemistry).

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 13:30-14:00

Horizon: Bioengineering

Collagen mechanics: from basic understanding to clinical applications

registration is required for this event

UserDr Michelle Oyen, Department of Engineering.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 01 October 2008, 11:15-11:45

SciComp@Cam: Scientific Computing in Cambridge

Development tools for mobile devices

UserAlexander Griekspoor (mekentosj.com), Alistair de B Clarkson (nCipher).

HouseCCBI, Centre for Mathematical Sciences.

ClockThursday 18 September 2008, 17:30-19:30

SciComp@Cam: Scientific Computing in Cambridge

Provisional: Field Programmable Gate Arrays

POSTPHONED TO LATER IN THE YEAR

UserSpeakers to be confirmed.

HouseCCBI, Centre for Mathematical Sciences.

ClockThursday 17 July 2008, 17:30-19:30

Disease Ontologies and Information (EBI, Hinxton, 19th June 2008)

Towards an Open Source Disease Ontology

http://diseaseontology.sf.net/

UserProf. Warren Kibbe (Northwestern University) & Prof. Lynn Schriml (U. Maryland School of Medicine).

HouseWTCC, Hinxton.

ClockThursday 19 June 2008, 11:10-11:50

Disease Ontologies and Information (EBI, Hinxton, 19th June 2008)

The OBO Foundry and PATO

UserProf. Michael Ashburner (University of Cambridge).

HouseWTCC, Hinxton.

ClockThursday 19 June 2008, 10:50-11:10

Disease Ontologies and Information (EBI, Hinxton, 19th June 2008)

Ontologies for Biologists – The Promise and the Reality

UserProf. Michael Ashburner, University of Cambridge (and former joint head of EMBL-EBI).

HouseWTCC, Hinxton.

ClockThursday 19 June 2008, 10:30-10:50

Disease Ontologies and Information (EBI, Hinxton, 19th June 2008)

Wellcome and Background to Meeting

UserProf. Janet Thornton & Dr. Dominic Clark (EMBL-EBI).

HouseWTCC, Hinxton.

ClockThursday 19 June 2008, 10:15-10:30

Disease Ontologies and Information (EBI, Hinxton, 19th June 2008)

Registration and Tea/Coffee

UserThere is no Registration Fee but pre-registration is requested.

HouseWTCC, Hinxton.

ClockThursday 19 June 2008, 09:30-10:15

Bioinformatics jounal club for the -omics

Wolfgang Huber from the EBI will be talking on the vsn method.

UserWolfgang Huber, European Bioinformatics Institute, Wellcome Trust Genome Campus.

HouseLecture Room, Sanger Building, Biochemistry Department.

ClockMonday 07 April 2008, 14:15-13:15

Computational and Systems Biology

tba

UserIrene Papatheodorou (Cancer Research Institute) University of Cambridge.

HouseMR5, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 05 March 2008, 15:00-16:00

SciComp@Cam: Scientific Computing in Cambridge

Python Tools for software development

UserOliver Stegle (University of Cambridge).

HouseCCBI, Centre for Mathematical Sciences.

ClockThursday 21 February 2008, 17:30-19:30

Druggability and the Genome (EBI, Hinxton, 4th February 2008)

Introduction and Overview

UserProf. Janet Thornton (Director, EMBL-European Bioinformatics Institute).

HouseRoom M203, Murray Building, Wellcome Trust Genome Campus, Hinxton.

ClockMonday 04 February 2008, 09:30-10:00

Computational and Systems Biology

tba

UserRichard Durbin, Wellcome Trust Sanger Institute.

HouseMR5, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 30 January 2008, 15:00-16:00

Computational and Systems Biology

Title to be confirmed

UserRichard Adams (Department of Physiology, Development and Neuroscience).

HouseMR14, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 28 November 2007, 15:00-16:00

Joint EBI/ Cambridge University Research Symposium

Joint EBI/ Cambridge University Research Symposium

UserMultiple speakers from the EBI and across Cambridge University.

HouseWellcome Trust Genome Campus, Hinxton Hall, Hinxton.

ClockFriday 21 September 2007, 09:15-17:15

Genetics Seminar Series

Alternative splicing in the human transcriptome: Functional and structural influence on proteins

ECTOPIC SEMINAR

UserDr. Kei Yura, Quantum Bioinformatics Team, Japan Atomic Energy Agency, Kyoto, Japan.

HouseBateson Room, Department of Genetics.

ClockWednesday 12 September 2007, 13:00-14:00

Bioinformatics jounal club for the -omics

Bootstrapping cluster analysis: assessing the reliability of conclusions

UserJules Griffin ( Department of Biochemistry, University of Cambridge).

HouseMeeting room 1 cambridge system biology centre.

ClockFriday 27 July 2007, 14:00-15:00

Systems Biology

Individual variation identifies evolutionary patterns between species

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserPaul Flicek, European Bioinformatics Institute.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Worldwide distribution of human genetic diversity

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserFrancois Balloux, Department of Genetics.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Worldwide distribution of human phenotypic diversity

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserAndrea Manica, Department of Zoology.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

The systems biology of influenza

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserDerek Smith, Department of Zoology.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Disease dynamics at different scales

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserJulia Gog, Applied Maths and Theoretical Physics.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Evolving mechanisms of pattern formation: Segmentation in arthropods

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserMichael Akam, Department of Zoology.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Developmental and evolutionary dynamics of the gap gene system.

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserJohannes Jaeger, Department of Zoology.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Disease in a changing landscape

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserChris Gilligan, Department of Plant Sciences.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

A systems approach to understand the condition dependency of genetic interactions

Population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserBalázs Papp, University of Manchester & BRC Szeged.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Systems Biology

Genomic approaches to speciation and fitness: old wines in new bottles

population and Evolutionary Approaches to Biological Systems 1 Day Symposium

UserSteve Oliver, University of Manchester & Department of Biochemistry.

HouseDepartment of Biochemistry, Sanger Building Lecture Theatre.

ClockFriday 13 July 2007, 09:30-17:25

Computational and Systems Biology

Computational genomics of structural RNAs

CCBI Distinguished Seminar Series

UserSean Eddy, HHMI Janelia Farm Research Campus.

HouseMR2, Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockFriday 06 July 2007, 16:30-17:30

Symposium on Computational Biology

DNA-binding computation at large and small scales

UserDr. Marco Consentino-Lagomarsino, Institut Curie, Paris.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 15:10-16:00

Symposium on Computational Biology

Insight into ion channel biophysics via computer simulations

UserDr. Carmen Domene, Department of Physical Chemistry, University of Oxford.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 14:20-15:10

Symposium on Computational Biology

Quadruple stranded DNA: cancer, gene regulation and evolution

UserDr. Julian Huppert, Department of Chemistry, University of Cambridge.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 13:30-14:20

Symposium on Computational Biology

Simulations of phase transitions: from colloids to proteins

UserDr. Stefan Auer, Department of Chemistry, University of Cambridge.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 11:40-12:30

Symposium on Computational Biology

The physics of protein folding

UserDr. Patricia Faisca, Universadade Nova de Lisboa.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 10:50-11:40

Symposium on Computational Biology

Measuring and predicting complexity

UserDr. Sebastian Ahnert, Cavendish Laboratory.

HousePippard Lecture Theatre, Cavendish Laboratory.

ClockTuesday 19 June 2007, 10:00-10:50

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

A human protein atlas

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserAnja Persson, Royal Institute of Technology, Stockholm.

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 16:45-17:30

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Genome regulation: a sequence-gazer's view.

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserThomas Down, The Wellcome Trust Sanger Institute.

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 14:45-15:30

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Learning from the worm: predicting phenotype from genotype

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserAndrew Fraser (Wellcome Trust Sanger Institute).

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 14:00-14:45

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Lies, damn lies and metabolomics - statistical approaches for processing metabolomic data.

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserJules Griffin, Department of Biochemistry, University of Cambridge.

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 12:15-01:00

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Oscillators and sychronisation in circadian rhythms

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserJorge Goncalves, Department of Engineering, University of Cambridge.

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 11:30-12:15

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Epidemics on Networks

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserKen Eames, CCBI, DAMTP.

HouseMeeting Room 2 at the Centre for Mathematical Sciences, Wilberforce Road, Cambridge.

ClockWednesday 23 May 2007, 10:15-11:00

One Day Meeting - Third Annual Symposium of the Cambridge Computational Biology Institute

Modelling the hidden world of protein activities

Registration required via http://www.ccbi.cam.ac.uk/Events/Workshops/symp_07.php

UserLorenz Wernisch, MRC Biostatistics Unit.

HouseMeeting Room 2 at the Centre for Mathematical Sciences.

ClockWednesday 23 May 2007, 09:30-10:15

Computational and Systems Biology

Automated image analysis for high-throughput cell-based microscopy assays with R and Bioconductor

User Dr. Oleg Sklyar, European Bioinformatics Institute-EMBL.

HouseMR5, DAMTP.

ClockWednesday 14 March 2007, 14:00-15:00

Computational and Systems Biology

Open Afternoon for MPhil in Computational Biology

UserProfessor Simon Tavare and Dr. Stephen Eglen.

HouseMR5, DAMTP.

ClockWednesday 07 March 2007, 14:00-17:00

Computational and Systems Biology

The FlyMine/ InterMine Project

UserGos Micklem, Cambridge Computational Biology Institute.

HouseMR5, DAMTP.

ClockWednesday 28 February 2007, 14:00-15:00

Computational and Systems Biology

Modelling Epidemics

UserPietro Lio, The Computer Laboratory, University of Cambridge.

HouseMR5, DAMTP.

ClockWednesday 21 February 2007, 14:00-15:00

Computational and Systems Biology

Monkeys on Trees: A Bayesian Approach to Inferring Primate Divergence Times

UserRichard Wilkinson, Centre for Mathematical Sciences.

HouseMR5, DAMTP.

ClockWednesday 14 February 2007, 14:00-15:00

Computational and Systems Biology

Identifying novel therapies for breast cancer using Independent Component Analysis

UserAndrew E Teschendorff (Cancer Research Institute, University of Cambridge).

HouseMR5, DAMTP.

ClockWednesday 07 February 2007, 14:00-15:00

Computational and Systems Biology

Identifying deletions and duplications from PCR data

All welcome and please feel free to join us for coffee and biscuits after the talk in the Pavilion G common room

UserDr. Andy Lynch (Department of Oncology).

HouseMR5, DAMTP.

ClockWednesday 31 January 2007, 14:00-15:00

Computational and Systems Biology

"Identifying deletions and duplications from PCR data"

This talk has been canceled/deleted

UserDr. Andy Lynch, Department of Oncology, University of Cambridge.

HouseMR5, DAMTP.

ClockMonday 29 January 2007, 14:00-15:00

Computational and Systems Biology

Machine Learning Methods for Uncovering cis-Regulatory Modules

UserDr Mark Craven, University of Wisconsin.

HouseMR5, DAMTP.

ClockWednesday 29 November 2006, 14:00-15:00

Computational and Systems Biology

Genome Informatics at the Sanger Institute

UserRichard Durbin, Wellcome Trust Sanger Institute.

HouseMR5, DAMTP.

ClockWednesday 22 November 2006, 14:00-15:00

Computational and Systems Biology

Cell signalling and oscillations

UserDr. Kojiro Kano, DAMTP and PDN, University of Cambridge.

HouseMR5, DAMTP.

ClockWednesday 01 November 2006, 14:00-15:00

Computational and Systems Biology

*ectopic seminar* Evidence for the existence of organism-specific regulatory elements that are linked to RNAi

* Ectopic Seminar at Genetics Department *

UserIsidore Rigoutsos, IBM T.J. Watson Research Center, Yorktown Heights, U.S.A..

HousePart II Room, Department of Genetics.

ClockTuesday 31 October 2006, 15:00-16:00

Computational and Systems Biology

Linear Separability of Gene Expression Dataset

UserDr. Benny Chor (University of Tel-Aviv).

HouseMR5, DAMTP.

ClockWednesday 18 October 2006, 14:00-15:00

Computational and Systems Biology

High resolution models of genome regulatory events

This lecture is part of the Distinguished Seminar Series run by the CCBI.

UserProf. David Gifford (MIT).

HouseMR2, DAMTP.

ClockMonday 09 October 2006, 16:30-17:30

Computational and Systems Biology

CCBI 2nd Annual Symposium

Userhttp://www.ccbi.cam.ac.uk/Events/Workshops/symp_06.php.

HouseMR2, DAMTP.

ClockWednesday 24 May 2006, 09:30-17:00

Computational and Systems Biology

Phase transitions in biopolymers: statistical mechanics of interacting loops

UserDavid Mukamel, The Weizmann Institute of Science.

HouseMR5, DAMTP.

ClockWednesday 08 March 2006, 14:00-15:00

Computational and Systems Biology

Modelling equine influenza

UserJames Woods, CIDC, Cambridge Veterinary School, University of Cambridge.

HouseMR5, DAMTP.

ClockWednesday 01 March 2006, 14:00-15:00

Computational and Systems Biology

To be confirmed

UserDaniel Wolpert.

HouseMR5, DAMTP.

ClockWednesday 22 February 2006, 14:00-15:00

Computational and Systems Biology

To be confirmed

UserDaniel Crowther.

HouseMR5, DAMTP.

ClockWednesday 15 February 2006, 14:00-15:00

Computational and Systems Biology

Disease in a changing landscape

UserProfessor Chris Gilligan, Department of Plant Sciences, University of Cambridge.

HouseMR5, DAMTP.

ClockWednesday 08 February 2006, 14:00-15:00

Computational and Systems Biology

TBC

UserProf. David Balding, Department of Epdemiology and Public Health, Imperial College.

HouseMR5, DAMTP.

ClockWednesday 01 February 2006, 14:00-15:00

Computational and Systems Biology

Mathematical Models of Tumour Dormancy

UserDr Karen Page, Department of Computer Science, UCL.

HouseMR5, DAMTP.

ClockWednesday 25 January 2006, 14:00-15:00

Please see above for contact details for this list.

 

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