Room 132, CRI
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RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression
Title to be confirmed
A Global Protein Kinase and Phosphatase Interaction Network in Yeast
"GREAT improves functional interpretation of cis-regulatory regions"
Increased entropy of signal transduction in the cancer metastasis phenotype
Binding Site Turnover Produces Pervasive Quantitative Changes in Transcription Factor Binding between Closely Related Drosophila Species
Characterization of the RNA content of chromatin
Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors.
Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes.
Epistasis in a quantitative trait captured by a molecular model of transcription factor interactions.
A pathway-based classiο¬cation of human breast cancer
Noncoding human Y RNAs are overexpressed in tumours and required for cell proliferation
SNP arrays in heterogeneous tissue: highly accurate collection of both germline and somatic genetic information from unpaired single tumor samples.
Exon Array Analysis of Head and Neck Cancers Identifies a Hypoxia Related Splice Variant of LAMA3 Associated with a Poor Prognosis
A kernel-based integration of genome=wide data for clinical decision support
Global patterns of cis variation in human cells revealed by high-density allelic expression analysis.
DERIVING CHEMOSENSITIVITY FROM CELL LINES: FORENSIC BIOINFORMATICS AND REPRODUCIBLE RESEARCH IN HIGH-THROUGHPUT BIOLOGY
Image analysis for automatic cellularity scoring
Close reading of Shen et al, Bioinformatics 2009
Discussion of Plaisier et al (2009)
Journal Club on "Reverse engineering the genotype-phenotype map with natural genetic variation."
Bild et al (Nature 2006) Oncogenic pathway signatures in human cancers as a guide to targeted therapies.
Copy number variation, segmentation algorithms, et al
Bayesian unsupervised learning with multiple data types
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Ana-Teresa Maia (CRI).
Monday 24 January 2011, 15:00-16:30