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CATEGORIES:Plant Sciences 'ABC' Seminars
SUMMARY: A Step-by-Step Guide to Phylogenetic Analysis - S
 ebastian Mueller
DTSTART;TZID=Europe/London:20120321T130000
DTEND;TZID=Europe/London:20120321T140000
UID:TALK36965AThttp://talks.cam.ac.uk
URL:http://talks.cam.ac.uk/talk/index/36965
DESCRIPTION:Phylogenetic trees represent evolutionary history\
 , by showing the course of evolution of species fr
 om genomic sequences. These trees can reveal conne
 ctions between different species as well as charac
 terise new unknown sequences in the tree-of-life. 
 With the decreasing cost of high-throughput sequen
 cing\, characterisation of unknown sequences seems
  to be a popular question. I will present a case s
 tudy on characterising a single sequence using phy
 logeny\; a step-by-step guide of constructing a ph
 ylogenetic tree using software framework for phylo
 genetic analysis\, EPoS. We will cover BLAST\, Mul
 tiple Sequence Aligment (MSA)\, reconstruction of 
 consensus trees and  comparing the generated tree 
 to the tree-of-life. For your interest\, we will a
 lso provide supplementary materials which you can 
 visit to learn more techniques and gain a deeper u
 nderstanding of the underlying theory of tree gene
 ration. \n 
LOCATION:Department of Plant Sciences\, Large Lecture Theat
 re
CONTACT:Risha
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